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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3205 from
Pseudomonas fluorescens FW300-N2E2
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4248
SAM-dependent methyltransferases
no
0.25
2
Pf6N2E2
_628
2-ketogluconate transporter
no
0.24
3
Pf6N2E2
_5466
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.24
4
Pf6N2E2
_5269
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
no
0.23
5
Pf6N2E2
_3498
FIG00953349: hypothetical protein
no
0.23
6
Pf6N2E2
_4244
Glycosyltransferase
no
0.23
7
Pf6N2E2
_3936
Outer membrane protein assembly factor YaeT precursor
no
0.22
8
Pf6N2E2
_4568
Predicted signal transduction protein
no
0.22
9
Pf6N2E2
_3988
Non-ribosomal peptide synthetase modules and related proteins
no
0.21
10
Pf6N2E2
_1832
COGs COG3777
no
0.21
11
Pf6N2E2
_2548
Oxidoreductase, short chain dehydrogenase/reductase family
no
0.21
12
Pf6N2E2
_5599
Electron transport complex protein RnfA
no
0.21
13
Pf6N2E2
_4231
rarD protein
no
0.20
14
Pf6N2E2
_8
TonB-dependent siderophore receptor
no
0.20
15
Pf6N2E2
_3852
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
no
0.20
16
Pf6N2E2
_2002
hypothetical protein
no
0.20
17
Pf6N2E2
_472
FKBP-type peptidyl-prolyl cis-trans isomerase
no
0.20
18
Pf6N2E2
_1594
Tia invasion determinant-related protein precursor
no
0.19
19
Pf6N2E2
_1603
hypothetical protein
no
0.19
20
Pf6N2E2
_5736
FIG00961250: hypothetical protein
no
0.19
Or look for
negative cofitness