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  • Top cofit genes for Pf6N2E2_3205 from Pseudomonas fluorescens FW300-N2E2

    Mobile element protein
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_4248 SAM-dependent methyltransferases no 0.25
    2 Pf6N2E2_628 2-ketogluconate transporter no 0.24
    3 Pf6N2E2_5466 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.24
    4 Pf6N2E2_5269 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) no 0.23
    5 Pf6N2E2_3498 FIG00953349: hypothetical protein no 0.23
    6 Pf6N2E2_4244 Glycosyltransferase no 0.23
    7 Pf6N2E2_3936 Outer membrane protein assembly factor YaeT precursor no 0.22
    8 Pf6N2E2_4568 Predicted signal transduction protein no 0.22
    9 Pf6N2E2_3988 Non-ribosomal peptide synthetase modules and related proteins no 0.21
    10 Pf6N2E2_1832 COGs COG3777 no 0.21
    11 Pf6N2E2_2548 Oxidoreductase, short chain dehydrogenase/reductase family no 0.21
    12 Pf6N2E2_5599 Electron transport complex protein RnfA no 0.21
    13 Pf6N2E2_4231 rarD protein no 0.20
    14 Pf6N2E2_8 TonB-dependent siderophore receptor no 0.20
    15 Pf6N2E2_3852 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.20
    16 Pf6N2E2_2002 hypothetical protein no 0.20
    17 Pf6N2E2_472 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.20
    18 Pf6N2E2_1594 Tia invasion determinant-related protein precursor no 0.19
    19 Pf6N2E2_1603 hypothetical protein no 0.19
    20 Pf6N2E2_5736 FIG00961250: hypothetical protein no 0.19

    Or look for negative cofitness