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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3002 from
Pseudomonas fluorescens FW300-N2E2
Phage FluMu protein gp47
SEED: Phage FluMu protein gp47
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1221
sodium/hydrogen exchanger family protein
no
0.27
2
Pf6N2E2
_5390
Uricase (urate oxidase) (EC 1.7.3.3)
no
0.24
3
Pf6N2E2
_5697
Flagellar hook protein FlgE
0.48
0.24
4
Pf6N2E2
_2579
Flagellar biosynthesis protein FliQ
no
0.24
5
Pf6N2E2
_2595
Flagellar regulatory protein FleQ
no
0.24
6
Pf6N2E2
_5695
Flagellar basal-body rod protein FlgC
no
0.24
7
Pf6N2E2
_2583
Flagellar motor switch protein FliM
0.40
0.23
8
Pf6N2E2
_4593
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
no
0.23
9
Pf6N2E2
_109
Hydrolases of the alpha/beta superfamily
no
0.23
10
Pf6N2E2
_2626
Flagellar L-ring protein FlgH
no
0.23
11
Pf6N2E2
_5691
Flagellar basal-body P-ring formation protein FlgA
no
0.23
12
Pf6N2E2
_2565
CheW domain protein
0.23
0.22
13
Pf6N2E2
_2592
Flagellar motor switch protein FliG
no
0.22
14
Pf6N2E2
_2063
Predicted cobalt transporter CbtA
no
0.22
15
Pf6N2E2
_2593
Flagellar M-ring protein FliF
no
0.22
16
Pf6N2E2
_4996
LSU m3Psi1915 methyltransferase RlmH
no
0.22
17
Pf6N2E2
_4044
Holliday junction resolvasome, helicase subunit
no
0.22
18
Pf6N2E2
_2590
Flagellum-specific ATP synthase FliI
0.41
0.22
19
Pf6N2E2
_977
FIG004780: hypothetical protein in PFGI-1-like cluster
no
0.22
20
Pf6N2E2
_2710
FIG00953701: hypothetical protein
no
0.22
Or look for
negative cofitness