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  • Top cofit genes for Pf6N2E2_2533 from Pseudomonas fluorescens FW300-N2E2

    Rhodanese domain protein UPF0176
    SEED: Rhodanese domain protein UPF0176
    KEGG: UPF0176 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_1389 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8) no 0.64
    2 Pf6N2E2_1393 hypothetical protein no 0.62
    3 Pf6N2E2_1398 Rhodanese-related sulfurtransferase no 0.62
    4 Pf6N2E2_1391 DNA-binding response regulator, LuxR family no 0.61
    5 Pf6N2E2_1379 Sensory box histidine kinase/response regulator no 0.59
    6 Pf6N2E2_1387 Cytochrome C550 (Soluble cytochrome C) no 0.59
    7 Pf6N2E2_1399 Transcriptional regulator, LuxR family no 0.58
    8 Pf6N2E2_4776 Coenzyme PQQ synthesis protein F no 0.58
    9 Pf6N2E2_4772 Coenzyme PQQ synthesis protein E no 0.58
    10 Pf6N2E2_1392 sensor histidine kinase no 0.57
    11 Pf6N2E2_4774 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) no 0.56
    12 Pf6N2E2_828 Transcriptional regulator, TetR family no 0.55
    13 Pf6N2E2_694 Outer membrane protein (porin) no 0.54
    14 Pf6N2E2_5406 FIG00958224: hypothetical protein 0.18 0.52
    15 Pf6N2E2_5365 Heavy metal sensor histidine kinase 0.41 0.52
    16 Pf6N2E2_5178 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) 0.54 0.51
    17 Pf6N2E2_5705 Sensor protein PhoQ (EC 2.7.13.3) 0.79 0.51
    18 Pf6N2E2_4889 Putative transport protein 0.48 0.51
    19 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.51 0.51
    20 Pf6N2E2_4980 hypothetical protein no 0.50

    Or look for negative cofitness