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  • Top cofit genes for Pf6N2E2_2479 from Pseudomonas fluorescens FW300-N2E2

    Transcription elongation factor GreB
    SEED: Transcription elongation factor GreB
    KEGG: transcription elongation factor GreB

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2067 cis/trans isomerase no 0.31
    2 Pf6N2E2_463 Transcriptional regulatory protein RstA no 0.28
    3 Pf6N2E2_2723 YcgN (Fragment) 0.26 0.27
    4 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.61 0.26
    5 Pf6N2E2_5901 hypothetical protein no 0.25
    6 Pf6N2E2_2482 Transglycosylase, Slt family no 0.25
    7 Pf6N2E2_464 Sensory histidine kinase QseC no 0.25
    8 Pf6N2E2_5406 FIG00958224: hypothetical protein no 0.25
    9 Pf6N2E2_449 Lactoylglutathione lyase (EC 4.4.1.5) 0.44 0.25
    10 Pf6N2E2_701 Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL no 0.24
    11 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) 0.59 0.23
    12 Pf6N2E2_2768 Tricarboxylate transport protein TctC no 0.23
    13 Pf6N2E2_2179 Putrescine importer 0.63 0.23
    14 Pf6N2E2_887 hypothetical protein no 0.23
    15 Pf6N2E2_792 hypothetical protein no 0.23
    16 Pf6N2E2_3260 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.60 0.23
    17 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) 0.60 0.23
    18 Pf6N2E2_1558 Sensor histidine kinase/response regulator no 0.23
    19 Pf6N2E2_1491 Cystathionine beta-lyase (EC 4.4.1.8) no 0.22
    20 Pf6N2E2_608 Transcriptional regulator of the arabinose operon in Shewanella, GntR family no 0.22

    Or look for negative cofitness