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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_247 from
Pseudomonas fluorescens FW300-N2E2
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4692
dehydrocarnitine cleavage enzyme (EC 2.3.1.-)
(from data)
no
0.27
2
Pf6N2E2
_4689
L-carnitine 3-dehydrogenase, B subunit (EC 1.1.1.108)
(from data)
0.35
0.25
3
Pf6N2E2
_4690
L-carnitine 3-dehydrogenase, A subunit (EC 1.1.1.108)
(from data)
0.29
0.24
4
Pf6N2E2
_4714
GbcB Glycine betaine demethylase subunit B
0.53
0.23
5
Pf6N2E2
_4704
Dimethylglycine dehydrogenase (ferredoxin), FeS subunit DgcB (EC 1.5.7.-)
(from data)
0.52
0.23
6
Pf6N2E2
_4685
L-serine dehydratase (EC 4.3.1.17)
0.57
0.23
7
Pf6N2E2
_2042
Acetoacetyl-CoA synthetase (EC 6.2.1.16)
0.25
0.22
8
Pf6N2E2
_4713
GbcA Glycine betaine demethylase subunit A
0.53
0.22
9
Pf6N2E2
_4682
ABC transporter for Carnitine, permease component
(from data)
0.49
0.22
10
Pf6N2E2
_4239
Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40)
no
0.21
11
Pf6N2E2
_4702
DgcA Dimethylglycine demethylase subunit A
0.54
0.21
12
Pf6N2E2
_4701
FIG00953113: hypothetical protein
0.54
0.20
13
Pf6N2E2
_4718
Sarcosine oxidase beta subunit (EC 1.5.3.1)
0.51
0.20
14
Pf6N2E2
_244
Nitrilotriacetate monooxygenase component A (EC 1.14.13.-)
no
0.20
15
Pf6N2E2
_4686
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
0.49
0.19
16
Pf6N2E2
_1366
FIG002465: BNR repeat protein
no
0.19
17
Pf6N2E2
_4720
Sarcosine oxidase alpha subunit (EC 1.5.3.1)
0.53
0.19
18
Pf6N2E2
_4700
Microsomal dipeptidase (EC 3.4.13.19)
0.53
0.19
19
Pf6N2E2
_5260
Phosphate acetyltransferase (EC 2.3.1.8)
0.20
0.19
20
Pf6N2E2
_537
Na(+) H(+) antiporter subunit C
no
0.18
Or look for
negative cofitness