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  • Top cofit genes for Pf6N2E2_2464 from Pseudomonas fluorescens FW300-N2E2

    Transcription elongation factor
    SEED: Transcription elongation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2684 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) no 0.34
    2 Pf6N2E2_2478 FIG00809136: hypothetical protein 0.36 0.34
    3 Pf6N2E2_2469 hypothetical protein no 0.30
    4 Pf6N2E2_3902 Ribosomal protein S6 glutaminyl transferase 0.24 0.30
    5 Pf6N2E2_990 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.29
    6 Pf6N2E2_1158 Cyn operon transcriptional activator no 0.28
    7 Pf6N2E2_2472 hypothetical protein no 0.28
    8 Pf6N2E2_2476 Arylesterase precursor (EC 3.1.1.2) 0.28 0.27
    9 Pf6N2E2_3489 FIG00956297: hypothetical protein no 0.27
    10 Pf6N2E2_1172 Short-chain dehydrogenase/reductase SDR no 0.27
    11 Pf6N2E2_5142 Type IV fimbrial assembly, ATPase PilB no 0.27
    12 Pf6N2E2_1980 hypothetical protein no 0.26
    13 Pf6N2E2_1175 VgrG protein no 0.26
    14 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein 0.33 0.26
    15 Pf6N2E2_1249 Transcriptional regulator, AraC family no 0.26
    16 Pf6N2E2_2637 Metal-dependent phosphohydrolase, HD subdomain no 0.25
    17 Pf6N2E2_4437 Twin-arginine translocation protein TatB no 0.25
    18 Pf6N2E2_4112 NADPH:quinone oxidoreductase 2 no 0.25
    19 Pf6N2E2_2471 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.36 0.25
    20 Pf6N2E2_1787 ribosomal protein S6 glutaminyl transferase related protein no 0.24

    Or look for negative cofitness