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  • Top cofit genes for Pf6N2E2_2361 from Pseudomonas fluorescens FW300-N2E2

    Type III secretion chaperone protein for YopD (SycD)
    SEED: Type III secretion chaperone protein for YopD (SycD)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2707 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) no 0.29
    2 Pf6N2E2_2706 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.27
    3 Pf6N2E2_1352 Cation transport ATPase no 0.27
    4 Pf6N2E2_3938 Threonine dehydratase biosynthetic (EC 4.3.1.19) no 0.26
    5 Pf6N2E2_767 Fap amyloid fibril major component no 0.26
    6 Pf6N2E2_5676 Aspartokinase (EC 2.7.2.4) no 0.25
    7 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) no 0.25
    8 Pf6N2E2_2407 Acyclic terpenes utilization regulator AtuR, TetR family no 0.25
    9 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) no 0.25
    10 Pf6N2E2_692 Glucarate dehydratase (EC 4.2.1.40) no 0.25
    11 Pf6N2E2_4131 Sulfate permease no 0.25
    12 Pf6N2E2_1625 Ferric reductase (1.6.99.14) no 0.25
    13 Pf6N2E2_2813 Beta-lactamase class C and other penicillin binding proteins no 0.24
    14 Pf6N2E2_2442 sensor histidine kinase/response regulator no 0.24
    15 Pf6N2E2_2867 hypothetical protein no 0.24
    16 Pf6N2E2_5806 hypothetical protein no 0.24
    17 Pf6N2E2_91 Transcriptional regulator, LysR family no 0.24
    18 Pf6N2E2_1328 Methyl-accepting chemotaxis protein no 0.24
    19 Pf6N2E2_958 hypothetical protein no 0.23
    20 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) no 0.23

    Or look for negative cofitness