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  • Top cofit genes for Pf6N2E2_2350 from Pseudomonas fluorescens FW300-N2E2

    Oxygen-regulated invasion protein OrgB

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_43 Histidine permease YuiF no 0.24
    2 Pf6N2E2_2582 Flagellar motor switch protein FliN no 0.24
    3 Pf6N2E2_594 FMN reductase, NADPH-dependent no 0.24
    4 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE no 0.23
    5 Pf6N2E2_4031 Biofilm PGA outer membrane secretin PgaA no 0.22
    6 Pf6N2E2_2589 Flagellar protein FliJ no 0.22
    7 Pf6N2E2_443 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) no 0.22
    8 Pf6N2E2_278 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.22
    9 Pf6N2E2_428 Protease subunit of ATP-dependent Clp proteases no 0.22
    10 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG no 0.21
    11 Pf6N2E2_1027 Cysteine dioxygenase (EC 1.13.11.20) no 0.21
    12 Pf6N2E2_5893 FIG00956448: hypothetical protein no 0.21
    13 Pf6N2E2_4343 Phosphoprotein phosphatase PppA no 0.21
    14 Pf6N2E2_1503 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.21
    15 Pf6N2E2_1177 putative exported protein no 0.21
    16 Pf6N2E2_2825 RND efflux system, outer membrane lipoprotein CmeC no 0.21
    17 Pf6N2E2_2189 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) no 0.20
    18 Pf6N2E2_1989 hypothetical protein no 0.20
    19 Pf6N2E2_1291 Ferrichrome-iron receptor no 0.20
    20 Pf6N2E2_1908 NADP oxidoreductase, coenzyme F420-dependent no 0.20

    Or look for negative cofitness