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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_2350 from
Pseudomonas fluorescens FW300-N2E2
Oxygen-regulated invasion protein OrgB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_43
Histidine permease YuiF
no
0.24
2
Pf6N2E2
_2582
Flagellar motor switch protein FliN
no
0.24
3
Pf6N2E2
_594
FMN reductase, NADPH-dependent
no
0.24
4
Pf6N2E2
_3980
Type I secretion system, outer membrane component LapE
no
0.23
5
Pf6N2E2
_4031
Biofilm PGA outer membrane secretin PgaA
no
0.22
6
Pf6N2E2
_2589
Flagellar protein FliJ
no
0.22
7
Pf6N2E2
_443
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
no
0.22
8
Pf6N2E2
_278
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.22
9
Pf6N2E2
_428
Protease subunit of ATP-dependent Clp proteases
no
0.22
10
Pf6N2E2
_2627
Flagellar basal-body rod protein FlgG
no
0.21
11
Pf6N2E2
_1027
Cysteine dioxygenase (EC 1.13.11.20)
no
0.21
12
Pf6N2E2
_5893
FIG00956448: hypothetical protein
no
0.21
13
Pf6N2E2
_4343
Phosphoprotein phosphatase PppA
no
0.21
14
Pf6N2E2
_1503
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
no
0.21
15
Pf6N2E2
_1177
putative exported protein
no
0.21
16
Pf6N2E2
_2825
RND efflux system, outer membrane lipoprotein CmeC
no
0.21
17
Pf6N2E2
_2189
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
no
0.20
18
Pf6N2E2
_1989
hypothetical protein
no
0.20
19
Pf6N2E2
_1291
Ferrichrome-iron receptor
no
0.20
20
Pf6N2E2
_1908
NADP oxidoreductase, coenzyme F420-dependent
no
0.20
Or look for
negative cofitness