Top cofit genes for Pf6N2E2_2302 from Pseudomonas fluorescens FW300-N2E2

CAAX amino terminal protease family protein
SEED: CAAX amino terminal protease family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Pf6N2E2_3508		Probable two-component response regulator	0.36	0.61
2	Pf6N2E2_5692		Chemotaxis protein CheV (EC 2.7.3.-)	0.36	0.60
3	Pf6N2E2_3827		FIG00955429: hypothetical protein	no	0.56
4	Pf6N2E2_2438		hypothetical protein	no	0.54
5	Pf6N2E2_3625		Flagellar motor rotation protein MotA	0.32	0.53
6	Pf6N2E2_3624		Flagellar motor rotation protein MotB	no	0.53
7	Pf6N2E2_5874		TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins	0.38	0.52
8	Pf6N2E2_3626		Predicted signal transduction protein	0.28	0.52
9	Pf6N2E2_5873		FIG00953467: hypothetical protein	0.71	0.49
10	Pf6N2E2_4401		Glycine cleavage system transcriptional activator	0.34	0.48
11	Pf6N2E2_2601		Flagellin protein FlaG	0.30	0.48
12	Pf6N2E2_5872		Sensor histidine kinase/response regulator	0.36	0.47
13	Pf6N2E2_815		Signal transduction histidine kinase	0.29	0.46
14	Pf6N2E2_4616		type IV pilus biogenesis protein PilJ	0.27	0.45
15	Pf6N2E2_5720		BarA sensory histidine kinase (= VarS = GacS)	no	0.44
16	Pf6N2E2_2022		BarA-associated response regulator UvrY (= GacA = SirA)	no	0.43
17	Pf6N2E2_379		hypothetical protein	no	0.42
18	Pf6N2E2_2756		RNA polymerase sigma-H factor AlgT	no	0.42
19	Pf6N2E2_2612		O-antigen biosynthesis protein	no	0.41
20	Pf6N2E2_1675		Lipid carrier protein or keto acyl-CoA thiolase Ltp3 (EC 2.3.1.16)	no	0.40

Or look for negative cofitness