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  • Top cofit genes for Pf6N2E2_2253 from Pseudomonas fluorescens FW300-N2E2

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2252 NreA-like protein no 0.64
    2 Pf6N2E2_2254 Cell filamentation protein fic 0.48 0.62
    3 Pf6N2E2_3317 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.56
    4 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) no 0.55
    5 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase no 0.54
    6 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.51
    7 Pf6N2E2_291 ATP-dependent Clp protease adaptor protein ClpS no 0.51
    8 Pf6N2E2_3318 putative non-ribosomal peptide synthetase no 0.51
    9 Pf6N2E2_4754 Protein rarD no 0.44
    10 Pf6N2E2_3114 Transcriptional regulator, TetR family no 0.44
    11 Pf6N2E2_5242 Malate:quinone oxidoreductase (EC 1.1.5.4) no 0.42
    12 Pf6N2E2_4734 Acyltransferase family protein no 0.41
    13 Pf6N2E2_3521 Sensor histidine kinase/response regulator no 0.40
    14 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.16 0.40
    15 Pf6N2E2_6077 Cysteine desulfurase (EC 2.8.1.7) no 0.38
    16 Pf6N2E2_2466 Universal stress protein family no 0.38
    17 Pf6N2E2_2552 Cytochrome c heme lyase subunit CcmH 0.18 0.38
    18 Pf6N2E2_3319 Peptide synthetase no 0.38
    19 Pf6N2E2_2423 Molybdenum cofactor biosynthesis protein MoaB no 0.37
    20 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA 0.29 0.37

    Or look for negative cofitness