Top cofit genes for Pf6N2E2_224 from Pseudomonas fluorescens FW300-N2E2

transcription factor nitR
SEED: transcription factor nitR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Pf6N2E2_96		FIG011065: hypothetical protein	no	0.32
2	Pf6N2E2_4228		Chemotactic transducer	no	0.32
3	Pf6N2E2_3949		RND efflux transporter	no	0.31
4	Pf6N2E2_3950		Efflux membrane fusion protein, RND family	no	0.31
5	Pf6N2E2_1905		Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)	no	0.31
6	Pf6N2E2_4124		Uncharacterized protein with LysM domain, COG1652	0.32	0.30
7	Pf6N2E2_1989		hypothetical protein	no	0.30
8	Pf6N2E2_1176		Mll2356 protein	no	0.29
9	Pf6N2E2_2426		Similar to ribosomal large subunit pseudouridine synthase A	no	0.29
10	Pf6N2E2_1557		hypothetical protein	no	0.28
11	Pf6N2E2_2123		hypothetical protein	no	0.28
12	Pf6N2E2_3018		FIG00955390: hypothetical protein	no	0.28
13	Pf6N2E2_5291		Fumarylacetoacetase (EC 3.7.1.2)	0.45	0.28
14	Pf6N2E2_5170		FIG00955330: hypothetical protein	no	0.27
15	Pf6N2E2_2378		Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data)	no	0.27
16	Pf6N2E2_3316		Fe-S oxidoreductase	no	0.26
17	Pf6N2E2_4305		FIG00959590: hypothetical protein	no	0.26
18	Pf6N2E2_1897		Cytochrome B561	0.28	0.26
19	Pf6N2E2_2962		ABC transporter for L-Lysine, ATPase component (from data)	no	0.26
20	Pf6N2E2_3037		RNA polymerase sigma factor RpoS	0.18	0.26

Or look for negative cofitness