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  • Top cofit genes for Pf6N2E2_2207 from Pseudomonas fluorescens FW300-N2E2

    cytochrome b(561)
    SEED: cytochrome b(561)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3325 ABC transporter, ATP-binding protein no 0.32
    2 Pf6N2E2_1305 Homoprotocatechuate degradative operon repressor no 0.28
    3 Pf6N2E2_49 FIG00967200: hypothetical protein no 0.28
    4 Pf6N2E2_1683 Fe2+-dicitrate sensor, membrane component 0.51 0.27
    5 Pf6N2E2_4044 Holliday junction resolvasome, helicase subunit no 0.27
    6 Pf6N2E2_905 FIG00962753: hypothetical protein no 0.27
    7 Pf6N2E2_87 hypothetical protein no 0.25
    8 Pf6N2E2_2019 hypothetical protein no 0.25
    9 Pf6N2E2_977 FIG004780: hypothetical protein in PFGI-1-like cluster no 0.25
    10 Pf6N2E2_6140 Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA no 0.24
    11 Pf6N2E2_4960 Transcriptional regulator, LysR family no 0.23
    12 Pf6N2E2_395 Glutathione S-transferase (EC 2.5.1.18) no 0.23
    13 Pf6N2E2_2163 Lysine 2,3-aminomutase (EC 5.4.3.2) no 0.23
    14 Pf6N2E2_561 Uncharacterized protein ImpA 0.44 0.23
    15 Pf6N2E2_1249 Transcriptional regulator, AraC family no 0.23
    16 Pf6N2E2_1671 Transcriptional regulator, TetR family no 0.23
    17 Pf6N2E2_468 DNA alkylation repair enzyme no 0.22
    18 Pf6N2E2_5947 FIG146278: Maf/YceF/YhdE family protein 0.54 0.22
    19 Pf6N2E2_5179 Putative sulfite oxidase subunit YedY 0.41 0.22
    20 Pf6N2E2_2183 hypothetical protein no 0.22

    Or look for negative cofitness