Top cofit genes for Pf6N2E2_2039 from Pseudomonas fluorescens FW300-N2E2

Sigma-54 dependent transcriptional regulator
SEED: Sigma-54 dependent transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Pf6N2E2_2042		Acetoacetyl-CoA synthetase (EC 6.2.1.16)	0.90	0.33
2	Pf6N2E2_2278		Transcription-repair coupling factor	0.38	0.29
3	Pf6N2E2_1892		Sulfite dehydrogenase cytochrome subunit SoxD	no	0.29
4	Pf6N2E2_145		putative exported protein	no	0.29
5	Pf6N2E2_1491		Cystathionine beta-lyase (EC 4.4.1.8)	no	0.28
6	Pf6N2E2_5730		FIG00954480: hypothetical protein	0.67	0.28
7	Pf6N2E2_18		Outer membrane pyoverdine eflux protein	0.52	0.27
8	Pf6N2E2_1815		Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	no	0.27
9	Pf6N2E2_144		Uncharacterized protein YtfM precursor	no	0.27
10	Pf6N2E2_5068		putative Cytochrome bd2, subunit I	no	0.27
11	Pf6N2E2_5886		DNA-binding response regulator GltR, controls specific porins for the entry of glucose	no	0.27
12	Pf6N2E2_4148		Glutamate-aspartate carrier protein	0.15	0.27
13	Pf6N2E2_833		Probable Co/Zn/Cd efflux system membrane fusion protein	no	0.26
14	Pf6N2E2_1883		Transcriptional regulator, TetR family	no	0.26
15	Pf6N2E2_6018		Fumarylacetoacetate hydrolase family protein	no	0.26
16	Pf6N2E2_2745		Metal-dependent hydrolases of the beta-lactamase superfamily I	no	0.26
17	Pf6N2E2_5567		Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4)	no	0.25
18	Pf6N2E2_4693		ABC transporter for Carnitine Hydrochloride, periplasmic substrate-binding component (from data)	0.70	0.25
19	Pf6N2E2_1510		FIG00450095: hypothetical protein	no	0.25
20	Pf6N2E2_4204		rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB	no	0.25

Or look for negative cofitness