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  • Top cofit genes for Pf6N2E2_1999 from Pseudomonas fluorescens FW300-N2E2

    putative membrane protein
    SEED: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3399 hypothetical protein no 0.28
    2 Pf6N2E2_3037 RNA polymerase sigma factor RpoS no 0.28
    3 Pf6N2E2_1336 AraC family transcription regulator no 0.27
    4 Pf6N2E2_1482 Probable periplasmic spermidine/putrescine-binding protein no 0.27
    5 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.26
    6 Pf6N2E2_2013 hypothetical protein no 0.26
    7 Pf6N2E2_396 hypothetical protein no 0.25
    8 Pf6N2E2_786 Type-1 fimbrial protein, A chain precursor no 0.25
    9 Pf6N2E2_3526 hypothetical protein no 0.25
    10 Pf6N2E2_3334 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) no 0.25
    11 Pf6N2E2_1857 hypothetical protein no 0.24
    12 Pf6N2E2_1077 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) no 0.24
    13 Pf6N2E2_224 transcription factor nitR no 0.24
    14 Pf6N2E2_6076 Transporter, LysE family no 0.24
    15 Pf6N2E2_3683 hypothetical protein no 0.24
    16 Pf6N2E2_86 FIG022160: hypothetical toxin no 0.23
    17 Pf6N2E2_4841 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) 0.27 0.23
    18 Pf6N2E2_1498 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain no 0.23
    19 Pf6N2E2_4036 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) no 0.23
    20 Pf6N2E2_925 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) no 0.23

    Or look for negative cofitness