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  • Top cofit genes for Pf6N2E2_1979 from Pseudomonas fluorescens FW300-N2E2

    Cytosine-specific DNA methyltransferase (EC 2.1.1.37)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_1379 Sensory box histidine kinase/response regulator no 0.43
    2 Pf6N2E2_1399 Transcriptional regulator, LuxR family no 0.42
    3 Pf6N2E2_1389 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8) no 0.41
    4 Pf6N2E2_1387 Cytochrome C550 (Soluble cytochrome C) no 0.41
    5 Pf6N2E2_828 Transcriptional regulator, TetR family no 0.39
    6 Pf6N2E2_1980 hypothetical protein no 0.39
    7 Pf6N2E2_1393 hypothetical protein no 0.39
    8 Pf6N2E2_1392 sensor histidine kinase no 0.39
    9 Pf6N2E2_1391 DNA-binding response regulator, LuxR family no 0.38
    10 Pf6N2E2_5365 Heavy metal sensor histidine kinase no 0.38
    11 Pf6N2E2_4772 Coenzyme PQQ synthesis protein E no 0.37
    12 Pf6N2E2_4776 Coenzyme PQQ synthesis protein F no 0.36
    13 Pf6N2E2_3489 FIG00956297: hypothetical protein no 0.35
    14 Pf6N2E2_1398 Rhodanese-related sulfurtransferase no 0.35
    15 Pf6N2E2_4774 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) no 0.35
    16 Pf6N2E2_1981 FIG051360: Periplasmic protein TonB, links inner and outer membranes no 0.34
    17 Pf6N2E2_1147 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) no 0.33
    18 Pf6N2E2_694 Outer membrane protein (porin) no 0.33
    19 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) no 0.31
    20 Pf6N2E2_1001 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.31

    Or look for negative cofitness