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  • Top cofit genes for Pf6N2E2_1907 from Pseudomonas fluorescens FW300-N2E2

    Choline dehydrogenase (EC 1.1.99.1)
    SEED: Choline dehydrogenase (EC 1.1.99.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_5240 FIG00953775: hypothetical protein 0.29 0.31
    2 Pf6N2E2_887 hypothetical protein no 0.30
    3 Pf6N2E2_3984 T1SS associated transglutaminase-like cysteine proteinase LapP no 0.30
    4 Pf6N2E2_1235 Secreted alkaline metalloproteinase (EC 3.4.24.-), PrtA/B/C/G homolog no 0.30
    5 Pf6N2E2_601 GlpG protein (membrane protein of glp regulon) no 0.30
    6 Pf6N2E2_5901 hypothetical protein no 0.30
    7 Pf6N2E2_6091 Epoxide hydrolase (EC 3.3.2.9) no 0.28
    8 Pf6N2E2_2750 Putative permease PerM (= YfgO) 0.34 0.28
    9 Pf6N2E2_2006 Rhs family protein no 0.28
    10 Pf6N2E2_1772 Signal transduction histidine kinase no 0.28
    11 Pf6N2E2_1715 hypothetical protein no 0.28
    12 Pf6N2E2_1924 6-phosphogluconolactonase (EC 3.1.1.31) no 0.27
    13 Pf6N2E2_6083 Threonine and homoserine efflux system no 0.27
    14 Pf6N2E2_2019 hypothetical protein no 0.26
    15 Pf6N2E2_2620 O-antigen biosynthesis protein no 0.26
    16 Pf6N2E2_813 Response regulator no 0.26
    17 Pf6N2E2_1884 oxidoreductase, short-chain dehydrogenase/reductase family no 0.25
    18 Pf6N2E2_1354 FIG026291: Hypothetical periplasmic protein no 0.25
    19 Pf6N2E2_4150 probable exported protein YPO0432 no 0.25
    20 Pf6N2E2_237 hypothetical protein no 0.24

    Or look for negative cofitness