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  • Top cofit genes for Pf6N2E2_18 from Pseudomonas fluorescens FW300-N2E2

    Outer membrane pyoverdine eflux protein
    SEED: Outer membrane pyoverdine eflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2039 Sigma-54 dependent transcriptional regulator 0.52 0.27
    2 Pf6N2E2_1510 FIG00450095: hypothetical protein 0.34 0.25
    3 Pf6N2E2_4018 RNA polymerase sigma-E factor no 0.25
    4 Pf6N2E2_2745 Metal-dependent hydrolases of the beta-lactamase superfamily I 0.73 0.23
    5 Pf6N2E2_550 Uncharacterized protein ImpH/VasB no 0.23
    6 Pf6N2E2_3713 Acyl carrier protein no 0.23
    7 Pf6N2E2_648 General secretion pathway protein K no 0.22
    8 Pf6N2E2_1881 Antibiotic biosynthesis monooxygenase no 0.21
    9 Pf6N2E2_921 putative nucleoside-diphosphate-sugar epimerase no 0.21
    10 Pf6N2E2_1135 COGs COG3558 no 0.21
    11 Pf6N2E2_4712 miscellaneous; unknown no 0.20
    12 Pf6N2E2_5266 Glycosyltransferase 0.34 0.20
    13 Pf6N2E2_1789 Kup system potassium uptake protein 0.34 0.20
    14 Pf6N2E2_1817 hypothetical protein no 0.20
    15 Pf6N2E2_1539 Two-component system response regulator QseB no 0.20
    16 Pf6N2E2_1030 Alkanesulfonate monooxygenase (EC 1.14.14.5) no 0.20
    17 Pf6N2E2_686 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.20
    18 Pf6N2E2_2768 Tricarboxylate transport protein TctC no 0.20
    19 Pf6N2E2_341 sensor histidine kinase no 0.19
    20 Pf6N2E2_4084 Transcriptional regulator no 0.19

    Or look for negative cofitness