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  • Top cofit genes for Pf6N2E2_1750 from Pseudomonas fluorescens FW300-N2E2

    Sigma-54 dependent transcriptional regulator
    SEED: Sigma-54 dependent transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_195 hypothetical protein no 0.25
    2 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) no 0.24
    3 Pf6N2E2_1238 hypothetical protein no 0.24
    4 Pf6N2E2_5026 Acyl-CoA dehydrogenase (EC 1.3.8.7) no 0.23
    5 Pf6N2E2_1596 Periplasmic nitrate reductase component NapD no 0.23
    6 Pf6N2E2_230 lignostilbene-alpha,beta-dioxygenase no 0.23
    7 Pf6N2E2_1795 Permeases of the drug/metabolite transporter (DMT) superfamily no 0.23
    8 Pf6N2E2_2603 hypothetical protein no 0.22
    9 Pf6N2E2_1679 SUGAR TRANSPORTER no 0.22
    10 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster no 0.22
    11 Pf6N2E2_2539 3-ketoacyl-CoA thiolase (EC 2.3.1.16) no 0.21
    12 Pf6N2E2_5049 acetyltransferase, GNAT family no 0.21
    13 Pf6N2E2_1240 Membrane protease family protein y2843 no 0.21
    14 Pf6N2E2_2157 Transcriptional regulator no 0.21
    15 Pf6N2E2_912 FIG00959090: hypothetical protein no 0.21
    16 Pf6N2E2_2023 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) no 0.21
    17 Pf6N2E2_1204 Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16) no 0.21
    18 Pf6N2E2_1701 ABC transporter ATP-binding protein no 0.21
    19 Pf6N2E2_1782 STAS domain protein no 0.21
    20 Pf6N2E2_2537 membrane protein, putative no 0.20

    Or look for negative cofitness