Top cofit genes for Pf6N2E2_1726 from Pseudomonas fluorescens FW300-N2E2

3-methylmercaptopropionyl-CoA ligase (DmdB)
SEED: 3-methylmercaptopropionyl-CoA ligase (DmdB)

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_5370 LysR family transcriptional regulator QseA 0.21 0.32
2 Pf6N2E2_5760 Sensory box histidine kinase/response regulator 0.17 0.28
3 Pf6N2E2_1730 Quinone oxidoreductase (EC 1.6.5.5) no 0.25
4 Pf6N2E2_281 Type II and III secretion system family protein no 0.24
5 Pf6N2E2_4041 Acetyl-CoA hydrolase (EC 3.1.2.1) no 0.24
6 Pf6N2E2_2257 tRNA dihydrouridine synthase A 0.59 0.24
7 Pf6N2E2_1419 Type I secretion outer membrane protein, TolC precursor 0.20 0.23
8 Pf6N2E2_507 Hydrogen cyanide synthase HcnB / Opine oxidase subunit A no 0.22
9 Pf6N2E2_2864 Gluconokinase (EC 2.7.1.12) no 0.22
10 Pf6N2E2_2007 Error-prone, lesion bypass DNA polymerase V (UmuC) no 0.22
11 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC no 0.22
12 Pf6N2E2_2365 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) no 0.22
13 Pf6N2E2_944 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone no 0.22
14 Pf6N2E2_3303 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.37 0.21
15 Pf6N2E2_3793 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) no 0.21
16 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.33 0.21
17 Pf6N2E2_542 hypothetical protein no 0.21
18 Pf6N2E2_1541 Short-chain dehydrogenase/reductase SDR 0.54 0.21
19 Pf6N2E2_4556 FIG00953078: hypothetical protein no 0.21
20 Pf6N2E2_1466 NAD-dependent formate dehydrogenase delta subunit no 0.21

Or look for negative cofitness