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  • Top cofit genes for Pf6N2E2_1454 from Pseudomonas fluorescens FW300-N2E2

    Xylose isomerase (EC 5.3.1.5)
    SEED: Xylose isomerase (EC 5.3.1.5)
    KEGG: xylose isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3322 Peptide synthetase no 0.26
    2 Pf6N2E2_816 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.24
    3 Pf6N2E2_2406 Periplasmic binding protein 0.37 0.24
    4 Pf6N2E2_1664 Nitrate/nitrite transporter 0.42 0.24
    5 Pf6N2E2_5704 Transcriptional regulatory protein PhoP 0.38 0.23
    6 Pf6N2E2_6075 Chromosome segregation ATPases no 0.22
    7 Pf6N2E2_1106 Chromosome initiation inhibitor no 0.21
    8 Pf6N2E2_3213 DNA-binding response regulator, AraC family 0.26 0.21
    9 Pf6N2E2_5864 FIG00953296: hypothetical protein no 0.21
    10 Pf6N2E2_3513 hypothetical protein no 0.21
    11 Pf6N2E2_1951 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family no 0.21
    12 Pf6N2E2_3851 bacteriophytochrome heme oxygenase BphO 0.51 0.21
    13 Pf6N2E2_4414 FIG00953808: hypothetical protein no 0.21
    14 Pf6N2E2_3399 hypothetical protein no 0.21
    15 Pf6N2E2_1211 Lactoylglutathione lyase no 0.21
    16 Pf6N2E2_1701 ABC transporter ATP-binding protein 0.09 0.21
    17 Pf6N2E2_3952 putative RecF protein no 0.20
    18 Pf6N2E2_2295 Lipid A export ATP-binding/permease protein MsbA no 0.20
    19 Pf6N2E2_1316 P-hydroxyphenylacetate hydroxylase C1:reductase component no 0.20
    20 Pf6N2E2_593 FIG00958166: hypothetical protein no 0.20

    Or look for negative cofitness