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  • Top cofit genes for Pf6N2E2_1419 from Pseudomonas fluorescens FW300-N2E2

    Type I secretion outer membrane protein, TolC precursor
    SEED: Type I secretion outer membrane protein, TolC precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_1399 Transcriptional regulator, LuxR family no 0.43
    2 Pf6N2E2_1379 Sensory box histidine kinase/response regulator no 0.42
    3 Pf6N2E2_4775 Coenzyme PQQ synthesis protein B no 0.42
    4 Pf6N2E2_694 Outer membrane protein (porin) no 0.41
    5 Pf6N2E2_4776 Coenzyme PQQ synthesis protein F no 0.41
    6 Pf6N2E2_1387 Cytochrome C550 (Soluble cytochrome C) no 0.41
    7 Pf6N2E2_1392 sensor histidine kinase no 0.41
    8 Pf6N2E2_1391 DNA-binding response regulator, LuxR family no 0.40
    9 Pf6N2E2_828 Transcriptional regulator, TetR family no 0.40
    10 Pf6N2E2_1389 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8) no 0.39
    11 Pf6N2E2_2552 Cytochrome c heme lyase subunit CcmH no 0.39
    12 Pf6N2E2_3489 FIG00956297: hypothetical protein no 0.38
    13 Pf6N2E2_1393 hypothetical protein no 0.38
    14 Pf6N2E2_1398 Rhodanese-related sulfurtransferase no 0.37
    15 Pf6N2E2_4153 Sensory box histidine kinase no 0.35
    16 Pf6N2E2_4772 Coenzyme PQQ synthesis protein E no 0.35
    17 Pf6N2E2_2317 Putative analog of CcoH, COG3198 no 0.35
    18 Pf6N2E2_5705 Sensor protein PhoQ (EC 2.7.13.3) 0.34 0.34
    19 Pf6N2E2_4774 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) no 0.34
    20 Pf6N2E2_4980 hypothetical protein no 0.34

    Or look for negative cofitness