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  • Top cofit genes for Pf6N2E2_1355 from Pseudomonas fluorescens FW300-N2E2

    Ribose operon repressor
    SEED: Ribose operon repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2548 Oxidoreductase, short chain dehydrogenase/reductase family no 0.32
    2 Pf6N2E2_2655 Agmatinase (EC 3.5.3.11) no 0.32
    3 Pf6N2E2_4150 probable exported protein YPO0432 no 0.30
    4 Pf6N2E2_333 hypothetical protein no 0.30
    5 Pf6N2E2_237 hypothetical protein no 0.29
    6 Pf6N2E2_695 Nitrite reductase associated c-type cytochorome NirN no 0.28
    7 Pf6N2E2_1772 Signal transduction histidine kinase no 0.27
    8 Pf6N2E2_4568 Predicted signal transduction protein no 0.27
    9 Pf6N2E2_3987 FIG00953743: hypothetical protein no 0.27
    10 Pf6N2E2_1361 Periplasmic protein p19 involved in high-affinity Fe2+ transport no 0.27
    11 Pf6N2E2_4295 hypothetical protein no 0.27
    12 Pf6N2E2_3128 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) no 0.27
    13 Pf6N2E2_2460 Lipase no 0.27
    14 Pf6N2E2_3687 FIG00959437: hypothetical protein no 0.26
    15 Pf6N2E2_2778 Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) no 0.26
    16 Pf6N2E2_989 Transcriptional regulator, LysR family no 0.26
    17 Pf6N2E2_4650 DNA ligase (EC 6.5.1.2) no 0.26
    18 Pf6N2E2_845 phosphoribosyltransferase no 0.26
    19 Pf6N2E2_2907 Arginine/ornithine antiporter ArcD no 0.25
    20 Pf6N2E2_5131 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.25

    Or look for negative cofitness