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Protein
Homologs
Top cofit genes for Pf6N2E2_1355 from
Pseudomonas fluorescens FW300-N2E2
Ribose operon repressor
SEED: Ribose operon repressor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_2548
Oxidoreductase, short chain dehydrogenase/reductase family
no
0.32
2
Pf6N2E2
_2655
Agmatinase (EC 3.5.3.11)
no
0.32
3
Pf6N2E2
_4150
probable exported protein YPO0432
no
0.30
4
Pf6N2E2
_333
hypothetical protein
no
0.30
5
Pf6N2E2
_237
hypothetical protein
no
0.29
6
Pf6N2E2
_695
Nitrite reductase associated c-type cytochorome NirN
no
0.28
7
Pf6N2E2
_1772
Signal transduction histidine kinase
no
0.27
8
Pf6N2E2
_4568
Predicted signal transduction protein
no
0.27
9
Pf6N2E2
_3987
FIG00953743: hypothetical protein
no
0.27
10
Pf6N2E2
_1361
Periplasmic protein p19 involved in high-affinity Fe2+ transport
no
0.27
11
Pf6N2E2
_4295
hypothetical protein
no
0.27
12
Pf6N2E2
_3128
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
no
0.27
13
Pf6N2E2
_2460
Lipase
no
0.27
14
Pf6N2E2
_3687
FIG00959437: hypothetical protein
no
0.26
15
Pf6N2E2
_2778
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
no
0.26
16
Pf6N2E2
_989
Transcriptional regulator, LysR family
no
0.26
17
Pf6N2E2
_4650
DNA ligase (EC 6.5.1.2)
no
0.26
18
Pf6N2E2
_845
phosphoribosyltransferase
no
0.26
19
Pf6N2E2
_2907
Arginine/ornithine antiporter ArcD
no
0.25
20
Pf6N2E2
_5131
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.25
Or look for
negative cofitness