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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_1241 from
Pseudomonas fluorescens FW300-N2E2
sensor histidine kinase
SEED: sensor histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_912
FIG00959090: hypothetical protein
no
0.32
2
Pf6N2E2
_640
Outer membrane TonB-dependent transducer VreA of trans-envelope signaling system
no
0.31
3
Pf6N2E2
_2163
Lysine 2,3-aminomutase (EC 5.4.3.2)
no
0.30
4
Pf6N2E2
_764
Fap amyloid fiber secretin
no
0.29
5
Pf6N2E2
_1257
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
no
0.28
6
Pf6N2E2
_3890
Formate dehydrogenase chain D (EC 1.2.1.2)
no
0.28
7
Pf6N2E2
_5169
FIG00954216: hypothetical protein
0.25
0.28
8
Pf6N2E2
_3496
lipoprotein, putative
no
0.28
9
Pf6N2E2
_6012
Integrase
no
0.28
10
Pf6N2E2
_3962
Fibronectin type III domain protein
0.27
0.28
11
Pf6N2E2
_585
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
no
0.27
12
Pf6N2E2
_2387
Ribonuclease E inhibitor RraA
no
0.27
13
Pf6N2E2
_1500
LysR family transcriptional regulator lrhA
no
0.26
14
Pf6N2E2
_5917
Type II/IV secretion system protein TadC, associated with Flp pilus assembly
no
0.26
15
Pf6N2E2
_5592
DNA-binding response regulator, LuxR family
no
0.26
16
Pf6N2E2
_357
hypothetical protein
no
0.26
17
Pf6N2E2
_2600
Flagellar hook-associated protein FliD
0.24
0.26
18
Pf6N2E2
_3121
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
no
0.25
19
Pf6N2E2
_2599
Flagellar biosynthesis protein FliS
0.30
0.25
20
Pf6N2E2
_5671
Succinylglutamate desuccinylase (EC 3.5.1.96)
no
0.25
Or look for
negative cofitness