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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_1228 from
Pseudomonas fluorescens FW300-N2E2
Lipase (EC 3.1.1.3)
SEED: Lipase (EC 3.1.1.3)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_813
Response regulator
no
0.28
2
Pf6N2E2
_2074
required for sulfate utilization, putative electron transport protein for sulfite reductase
(from data)
no
0.28
3
Pf6N2E2
_2120
Alpha-amylase (EC 3.2.1.1)
0.21
0.27
4
Pf6N2E2
_2117
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
no
0.26
5
Pf6N2E2
_2446
Aspartate aminotransferase (EC 2.6.1.1)
no
0.26
6
Pf6N2E2
_1749
Cyn operon transcriptional activator
no
0.26
7
Pf6N2E2
_4824
Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
no
0.26
8
Pf6N2E2
_3825
Nitrogen regulation protein NtrB (EC 2.7.13.3)
0.28
0.26
9
Pf6N2E2
_2442
sensor histidine kinase/response regulator
no
0.25
10
Pf6N2E2
_2285
FIG00954079: hypothetical protein
no
0.25
11
Pf6N2E2
_1725
Sensory box histidine kinase
no
0.25
12
Pf6N2E2
_3984
T1SS associated transglutaminase-like cysteine proteinase LapP
no
0.25
13
Pf6N2E2
_3977
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
no
0.25
14
Pf6N2E2
_64
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
no
0.24
15
Pf6N2E2
_3772
Polyhydroxyalkanoic acid synthase
no
0.24
16
Pf6N2E2
_6039
Probable lipoprotein signal peptide
no
0.24
17
Pf6N2E2
_63
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.24
18
Pf6N2E2
_4658
FIG00955006: hypothetical protein
no
0.23
19
Pf6N2E2
_2073
Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
no
0.23
20
Pf6N2E2
_3826
Nitrogen regulation protein NR(I)
no
0.23
Or look for
negative cofitness