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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_1194 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_5278
Signal transduction histidine kinase
no
0.35
2
Pf6N2E2
_3852
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
no
0.31
3
Pf6N2E2
_4829
OsmC/Ohr family protein
no
0.31
4
Pf6N2E2
_2006
Rhs family protein
no
0.30
5
Pf6N2E2
_5364
GGDEF domain protein
no
0.30
6
Pf6N2E2
_2217
ATP-dependent Clp protease ATP-binding subunit ClpX
no
0.29
7
Pf6N2E2
_1040
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
no
0.29
8
Pf6N2E2
_3637
yqiA-like hydrolase, affects the cell envelope
(from data)
no
0.28
9
Pf6N2E2
_541
Transcriptional regulator, Cro/CI family
no
0.28
10
Pf6N2E2
_816
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
no
0.27
11
Pf6N2E2
_4075
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
no
0.27
12
Pf6N2E2
_4414
FIG00953808: hypothetical protein
no
0.27
13
Pf6N2E2
_2857
Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)
no
0.27
14
Pf6N2E2
_2406
Periplasmic binding protein
no
0.27
15
Pf6N2E2
_2772
Uracil-DNA glycosylase, family 1
no
0.27
16
Pf6N2E2
_3876
Agmatine deiminase (EC 3.5.3.12)
no
0.26
17
Pf6N2E2
_4152
alginate biosynthesis transcriptional regulatory protein AlgB
no
0.26
18
Pf6N2E2
_3871
FIG00553872: hypothetical protein
no
0.26
19
Pf6N2E2
_2548
Oxidoreductase, short chain dehydrogenase/reductase family
no
0.26
20
Pf6N2E2
_935
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.26
Or look for
negative cofitness