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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_1109 from
Pseudomonas fluorescens FW300-N2E2
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_902
hypothetical protein
no
0.32
2
Pf6N2E2
_2940
OmpA family protein
no
0.29
3
Pf6N2E2
_1199
hypothetical protein
no
0.26
4
Pf6N2E2
_4386
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
0.33
0.26
5
Pf6N2E2
_3920
Cystine ABC transporter, permease protein
no
0.26
6
Pf6N2E2
_582
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
no
0.24
7
Pf6N2E2
_155
Probable transmembrane protein
no
0.24
8
Pf6N2E2
_1742
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
no
0.24
9
Pf6N2E2
_3607
3'-to-5' exoribonuclease RNase R
no
0.24
10
Pf6N2E2
_5785
Phosphoserine phosphatase (EC 3.1.3.3)
no
0.23
11
Pf6N2E2
_43
Histidine permease YuiF
no
0.23
12
Pf6N2E2
_1409
Excinuclease ABC subunit A paralog of unknown function
no
0.22
13
Pf6N2E2
_2436
DNA-binding response regulator, LuxR family
no
0.22
14
Pf6N2E2
_3753
DamX, an inner membrane protein involved in bile resistance
no
0.22
15
Pf6N2E2
_1931
Methyl-accepting chemotaxis protein
no
0.22
16
Pf6N2E2
_5705
Sensor protein PhoQ (EC 2.7.13.3)
no
0.22
17
Pf6N2E2
_1010
Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein)
no
0.22
18
Pf6N2E2
_4348
Autotransporter adhesin
no
0.22
19
Pf6N2E2
_3515
Probable transmembrane protein
no
0.22
20
Pf6N2E2
_3237
hypothetical protein
no
0.22
Or look for
negative cofitness