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  • Top cofit genes for Pf6N2E2_1055 from Pseudomonas fluorescens FW300-N2E2

    Transcriptional regulator MexT
    SEED: Transcriptional regulator MexT

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_824 Multidrug efflux transporter MexF 0.93 0.84
    2 Pf6N2E2_825 Multidrug efflux membrane fusion protein MexE 0.92 0.79
    3 Pf6N2E2_5482 FIG00954888: hypothetical protein no 0.54
    4 Pf6N2E2_823 Outer membrane protein OprN 0.78 0.50
    5 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family 0.37 0.47
    6 Pf6N2E2_5481 Transcriptional regulator, AraC family 0.29 0.32
    7 Pf6N2E2_1918 Major facilitator family transporter no 0.29
    8 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.32 0.24
    9 Pf6N2E2_2084 sensory box histidine kinase/response regulator no 0.24
    10 Pf6N2E2_1906 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.23
    11 Pf6N2E2_6044 Sensor histidine kinase/response regulator no 0.23
    12 Pf6N2E2_5987 OmpA family protein 0.73 0.22
    13 Pf6N2E2_5483 hypothetical protein no 0.22
    14 Pf6N2E2_2021 Excinuclease ABC subunit C 0.50 0.21
    15 Pf6N2E2_5919 Flp pilus assembly protein TadD, contains TPR repeats no 0.21
    16 Pf6N2E2_4173 Methionine ABC transporter permease protein 0.15 0.19
    17 Pf6N2E2_5219 FIG140336: TPR domain protein 0.42 0.19
    18 Pf6N2E2_3835 Carboxyl-terminal protease (EC 3.4.21.102) 0.41 0.19
    19 Pf6N2E2_3156 POSSIBLE MEMBRANE PROTEIN no 0.19
    20 Pf6N2E2_4944 Putative potassium channel protein no 0.19

    Or look for negative cofitness