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  • Top cofit genes for Pf6N2E2_1041 from Pseudomonas fluorescens FW300-N2E2

    Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_428 Protease subunit of ATP-dependent Clp proteases no 0.29
    2 Pf6N2E2_2702 FIG00962464: hypothetical protein no 0.28
    3 Pf6N2E2_5068 putative Cytochrome bd2, subunit I no 0.27
    4 Pf6N2E2_3303 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) no 0.26
    5 Pf6N2E2_594 FMN reductase, NADPH-dependent 0.18 0.26
    6 Pf6N2E2_1908 NADP oxidoreductase, coenzyme F420-dependent no 0.26
    7 Pf6N2E2_923 Haloacid dehalogenase, type II (EC 3.8.1.2) no 0.25
    8 Pf6N2E2_5069 putative Cytochrome bd2, subunit II no 0.25
    9 Pf6N2E2_1954 Transcriptional regulator, LysR family no 0.25
    10 Pf6N2E2_5523 Small-conductance mechanosensitive channel no 0.24
    11 Pf6N2E2_605 FIG002465: BNR repeat protein no 0.24
    12 Pf6N2E2_781 Outer membrane autotransporter barrel no 0.23
    13 Pf6N2E2_2284 Cell division inhibitor-related protein no 0.23
    14 Pf6N2E2_2229 Major facilitator family transporter no 0.23
    15 Pf6N2E2_2665 FIG00959721: hypothetical protein no 0.23
    16 Pf6N2E2_1920 Rubredoxin no 0.23
    17 Pf6N2E2_4036 Glutaryl-CoA dehydrogenase (EC 1.3.99.7) no 0.23
    18 Pf6N2E2_1276 FIG00958406: hypothetical protein no 0.22
    19 Pf6N2E2_5906 Flp pilus assembly protein, pilin Flp no 0.22
    20 Pf6N2E2_225 Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28) no 0.22

    Or look for negative cofitness