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  • Top cofit genes for Pf1N1B4_4448 from Pseudomonas fluorescens FW300-N1B4

    COGs COG2343

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf1N1B4_3989 small molecule metabolism no 0.37
    2 Pf1N1B4_2106 Hydrogen peroxide-inducible genes activator 0.39 0.30
    3 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY no 0.30
    4 Pf1N1B4_1706 RND efflux transporter no 0.29
    5 Pf1N1B4_4955 Methyltransferase no 0.29
    6 Pf1N1B4_2214 Transcriptional regulator, GntR family no 0.28
    7 Pf1N1B4_1057 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) no 0.28
    8 Pf1N1B4_3143 RecA protein no 0.27
    9 Pf1N1B4_465 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) no 0.27
    10 Pf1N1B4_3241 hypothetical protein no 0.26
    11 Pf1N1B4_5865 FIG00960493: hypothetical protein no 0.26
    12 Pf1N1B4_2033 L-Proline/Glycine betaine transporter ProP no 0.26
    13 Pf1N1B4_3161 hypothetical protein no 0.26
    14 Pf1N1B4_2061 hypothetical protein no 0.26
    15 Pf1N1B4_3859 Transcriptional regulator, Cro/CI family no 0.26
    16 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA no 0.26
    17 Pf1N1B4_2954 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.25
    18 Pf1N1B4_5629 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) no 0.25
    19 Pf1N1B4_2849 Acetyl-coenzyme A synthetase (EC 6.2.1.1) no 0.25
    20 Pf1N1B4_3467 Flagellar biosynthesis protein FlgN no 0.25

    Or look for negative cofitness