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Cofit
Protein
Homologs
Top cofit genes for Pf1N1B4_4448 from
Pseudomonas fluorescens FW300-N1B4
COGs COG2343
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf1N1B4
_3989
small molecule metabolism
no
0.37
2
Pf1N1B4
_2106
Hydrogen peroxide-inducible genes activator
0.39
0.30
3
Pf1N1B4
_3627
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
no
0.30
4
Pf1N1B4
_1706
RND efflux transporter
no
0.29
5
Pf1N1B4
_4955
Methyltransferase
no
0.29
6
Pf1N1B4
_2214
Transcriptional regulator, GntR family
no
0.28
7
Pf1N1B4
_1057
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25)
no
0.28
8
Pf1N1B4
_3143
RecA protein
no
0.27
9
Pf1N1B4
_465
Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
no
0.27
10
Pf1N1B4
_3241
hypothetical protein
no
0.26
11
Pf1N1B4
_5865
FIG00960493: hypothetical protein
no
0.26
12
Pf1N1B4
_2033
L-Proline/Glycine betaine transporter ProP
no
0.26
13
Pf1N1B4
_3161
hypothetical protein
no
0.26
14
Pf1N1B4
_2061
hypothetical protein
no
0.26
15
Pf1N1B4
_3859
Transcriptional regulator, Cro/CI family
no
0.26
16
Pf1N1B4
_2412
ATP-dependent 23S rRNA helicase DbpA
no
0.26
17
Pf1N1B4
_2954
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.25
18
Pf1N1B4
_5629
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
no
0.25
19
Pf1N1B4
_2849
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
no
0.25
20
Pf1N1B4
_3467
Flagellar biosynthesis protein FlgN
no
0.25
Or look for
negative cofitness