Top cofit genes for Pf1N1B4_3746 from Pseudomonas fluorescens FW300-N1B4

ABC transporter permease protein
SEED: ABC transporter permease protein
KEGG: putative spermidine/putrescine transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 Pf1N1B4_4888 UvrD/REP helicase family protein no 0.35
2 Pf1N1B4_5653 CobN component of cobalt chelatase involved in B12 biosynthesis no 0.34
3 Pf1N1B4_1848 Radical SAM domain protein no 0.33
4 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.19 0.32
5 Pf1N1B4_959 Stringent starvation protein A no 0.32
6 Pf1N1B4_2043 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) no 0.31
7 Pf1N1B4_3521 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.35 0.31
8 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG 0.18 0.31
9 Pf1N1B4_1583 Histidine ABC transporter, ATP-binding protein (TC 3.A.1) no 0.31
10 Pf1N1B4_4750 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.36 0.29
11 Pf1N1B4_3601 Flagellar regulatory protein FleQ no 0.29
12 Pf1N1B4_6009 tgtA5 cluster protein 3 no 0.29
13 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.21 0.29
14 Pf1N1B4_1212 Predicted flavin reductase RutF in novel pyrimidine catabolism pathway no 0.28
15 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) no 0.28
16 Pf1N1B4_4341 hypothetical protein no 0.28
17 Pf1N1B4_4191 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.26 0.28
18 Pf1N1B4_856 Type IV pilus biogenesis protein PilF no 0.28
19 Pf1N1B4_596 Glucose ABC transport system, periplasmic sugar-binding protein no 0.28
20 Pf1N1B4_2998 hypothetical protein 0.28 0.28

Or look for negative cofitness