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Cofit
Protein
Homologs
Top cofit genes for Pf1N1B4_3201 from
Pseudomonas fluorescens FW300-N1B4
Colicin E3 (EC 3.1.-.-)
SEED: Colicin E3 (EC 3.1.-.-)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf1N1B4
_4603
hypothetical protein
no
0.33
2
Pf1N1B4
_3972
ABC-type spermidine/putrescine transport system, permease component II
no
0.32
3
Pf1N1B4
_720
RND multidrug efflux transporter; Acriflavin resistance protein
no
0.31
4
Pf1N1B4
_2095
IcmF-related protein
no
0.29
5
Pf1N1B4
_2141
Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
no
0.28
6
Pf1N1B4
_6036
FIG00953132: hypothetical protein
no
0.27
7
Pf1N1B4
_57
tRNA dihydrouridine synthase A
no
0.26
8
Pf1N1B4
_2017
Transcriptional regulator
no
0.26
9
Pf1N1B4
_1424
hypothetical protein
no
0.26
10
Pf1N1B4
_1479
Sensory box/GGDEF family protein
no
0.26
11
Pf1N1B4
_649
Small-conductance mechanosensitive channel
no
0.26
12
Pf1N1B4
_535
FIG00953341: hypothetical protein
no
0.26
13
Pf1N1B4
_1853
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
no
0.25
14
Pf1N1B4
_3364
Cyn operon transcriptional activator
no
0.25
15
Pf1N1B4
_2033
L-Proline/Glycine betaine transporter ProP
no
0.25
16
Pf1N1B4
_1490
Acyl-CoA dehydrogenase (EC 1.3.8.7)
no
0.25
17
Pf1N1B4
_1658
Thioredoxin-like protein clustered with PA0057
no
0.25
18
Pf1N1B4
_5645
Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
no
0.25
19
Pf1N1B4
_199
FIG049111: Hypothetical protein in pyoverdin gene cluster
no
0.25
20
Pf1N1B4
_694
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
no
0.24
Or look for
negative cofitness