Top cofit genes for Pf1N1B4_2147 from Pseudomonas fluorescens FW300-N1B4

Putrescine utilization regulator
SEED: Putrescine utilization regulator

Rank Hit Name Description Conserved? Cofitness  
1 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.56 0.52
2 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.64 0.50
3 Pf1N1B4_2130 FIG00953403: hypothetical protein 0.62 0.47
4 Pf1N1B4_2419 High-affinity choline uptake protein BetT 0.35 0.44
5 Pf1N1B4_2131 hypothetical protein no 0.44
6 Pf1N1B4_2132 Aldehyde dehydrogenase (EC 1.2.1.3) 0.34 0.41
7 Pf1N1B4_1689 High-affinity choline uptake protein BetT 0.26 0.36
8 Pf1N1B4_3906 DNA topoisomerase I (EC 5.99.1.2) 0.69 0.35
9 Pf1N1B4_905 Nucleoid-associated protein 0.73 0.35
10 Pf1N1B4_648 Outer membrane porin, OprD family no 0.30
11 Pf1N1B4_1013 L-serine ammonia-lyase (EC 4.3.1.17) (from data) no 0.28
12 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.63 0.28
13 Pf1N1B4_647 hypothetical protein no 0.28
14 Pf1N1B4_844 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 0.16 0.28
15 Pf1N1B4_1315 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 0.56 0.28
16 Pf1N1B4_3337 Transcriptional regulator, LysR family no 0.28
17 Pf1N1B4_4972 CELL PROCESSES; Adaptation; adaptations, atypical conditions no 0.27
18 Pf1N1B4_5479 hypothetical protein no 0.27
19 Pf1N1B4_3349 YcgN (Fragment) 0.39 0.27
20 Pf1N1B4_4684 Malto-oligosyltrehalose synthase (EC 5.4.99.15) no 0.27

Or look for negative cofitness