Top cofit genes for PFLU_RS31005 from Pseudomonas fluorescens SBW25-INTG

tyrosine-type recombinase/integrase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PFLU_RS16090		OprD family porin	no	0.59
2	PFLU_RS28850		OprD family porin	no	0.43
3	PFLU_RS28325		energy transducer TonB	no	0.40
4	PFLU_RS08160		sugar transferase	no	0.36
5	PFLU_RS08180		ketoacyl-ACP synthase III	no	0.36
6	PFLU_RS26640		septal ring lytic transglycosylase RlpA family protein	no	0.36
7	PFLU_RS30520		ketoacyl-ACP synthase III	no	0.35
8	PFLU_RS30525		SDR family oxidoreductase	no	0.35
9	PFLU_RS12865		microcin C ABC transporter permease YejB	no	0.35
10	PFLU_RS02370		glycosyltransferase	no	0.35
11	PFLU_RS02365		glycosyltransferase	no	0.34
12	PFLU_RS12870		ABC transporter substrate-binding protein	no	0.34
13	PFLU_RS30530		acetyltransferase	no	0.34
14	PFLU_RS14820		4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase	no	0.33
15	PFLU_RS04315		rod shape-determining protein MreD	no	0.33
16	PFLU_RS08165		acyl carrier protein	0.41	0.33
17	PFLU_RS08185		DegT/DnrJ/EryC1/StrS aminotransferase family protein	no	0.32
18	PFLU_RS24805		helix-turn-helix domain-containing protein	no	0.32
19	PFLU_RS30515		Rieske 2Fe-2S domain-containing protein	no	0.32
20	PFLU_RS08190		polysaccharide biosynthesis protein	no	0.31

Or look for negative cofitness