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Cofit
Top cofit genes for PFLU_RS30865 from
Pseudomonas fluorescens SBW25-INTG
transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS26305
tRNA (uridine(54)-C5)-methyltransferase TrmA
no
0.29
2
PFLU
_RS29760
phosphate ABC transporter permease PstA
no
0.26
3
PFLU
_RS13875
ImmA/IrrE family metallo-endopeptidase
no
0.26
4
PFLU
_RS21155
rhodanese-related sulfurtransferase
no
0.25
5
PFLU
_RS12185
bifunctional transcriptional activator/DNA repair protein Ada
no
0.24
6
PFLU
_RS27515
glycerol-3-phosphate 1-O-acyltransferase PlsY
no
0.24
7
PFLU
_RS28915
glycine cleavage system aminomethyltransferase GcvT
no
0.23
8
PFLU
_RS13745
site-specific integrase
no
0.23
9
PFLU
_RS10770
excinuclease ABC subunit UvrC
no
0.23
10
PFLU
_RS07255
sulfurtransferase TusA family protein
no
0.23
11
PFLU
_RS21990
alpha-ribazole phosphatase family protein
no
0.22
12
PFLU
_RS25720
tRNA glutamyl-Q(34) synthetase GluQRS
no
0.22
13
PFLU
_RS26635
D-alanyl-D-alanine carboxypeptidase
no
0.22
14
PFLU
_RS07685
transcriptional repressor LexA
no
0.22
15
PFLU
_RS05590
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
no
0.22
16
PFLU
_RS17085
GntR family transcriptional regulator
no
0.21
17
PFLU
_RS18600
GNAT family N-acetyltransferase
no
0.21
18
PFLU
_RS13930
hypothetical protein
no
0.21
19
PFLU
_RS15795
hypothetical protein
no
0.21
20
PFLU
_RS14080
restriction endonuclease or methylase
no
0.21
Or look for
negative cofitness