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  • Top cofit genes for PFLU_RS23755 from Pseudomonas fluorescens SBW25-INTG

    sugar ABC transporter permease
    SEED: Glucose ABC transport system, inner membrane component 1
    KEGG: multiple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFLU_RS23760 carbohydrate ABC transporter substrate-binding protein 0.99 0.96
    2 PFLU_RS23750 carbohydrate ABC transporter permease 0.99 0.96
    3 PFLU_RS23745 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC 0.99 0.92
    4 PFLU_RS24315 HAMP domain-containing protein 0.99 0.92
    5 PFLU_RS24320 response regulator transcription factor 0.98 0.87
    6 PFLU_RS24325 glucokinase 0.99 0.56
    7 PFLU_RS24640 GntR family transcriptional regulator 0.42 0.56
    8 PFLU_RS25460 kynureninase 0.36 0.53
    9 PFLU_RS24330 phosphogluconate dehydratase 0.99 0.43
    10 PFLU_RS08450 LysR family transcriptional regulator no 0.40
    11 PFLU_RS23585 GntP family permease 0.69 0.34
    12 PFLU_RS23590 gluconokinase 0.49 0.31
    13 PFLU_RS23725 glucose-6-phosphate dehydrogenase 0.99 0.31
    14 PFLU_RS21300 cysteine hydrolase 0.91 0.28
    15 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.48 0.27
    16 PFLU_RS05385 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.56 0.25
    17 PFLU_RS23765 AGE family epimerase/isomerase 0.54 0.24
    18 PFLU_RS24125 cold-shock protein no 0.23
    19 PFLU_RS02340 TonB-dependent receptor 0.42 0.23
    20 PFLU_RS05855 phage tail protein no 0.22

    Or look for negative cofitness