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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS15680 from
Pseudomonas fluorescens SBW25-INTG
TonB-dependent receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS16410
glycogen synthase GlgA
0.48
0.50
2
PFLU
_RS26210
carbon starvation protein A
no
0.49
3
PFLU
_RS26205
YbdD/YjiX family protein
no
0.49
4
PFLU
_RS16425
malto-oligosyltrehalose synthase
no
0.48
5
PFLU
_RS16435
glycogen debranching protein GlgX
no
0.48
6
PFLU
_RS03880
ATP-dependent chaperone ClpB
no
0.48
7
PFLU
_RS07940
malate dehydrogenase (quinone)
no
0.47
8
PFLU
_RS06985
CoA transferase
no
0.46
9
PFLU
_RS23115
dicarboxylate/amino acid:cation symporter
no
0.44
10
PFLU
_RS01400
sigma-54-dependent Fis family transcriptional regulator
no
0.43
11
PFLU
_RS16415
malto-oligosyltrehalose trehalohydrolase
0.29
0.43
12
PFLU
_RS00065
lysophospholipid acyltransferase
no
0.39
13
PFLU
_RS13475
alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
no
0.39
14
PFLU
_RS00440
sigma-54-dependent Fis family transcriptional regulator
no
0.39
15
PFLU
_RS07230
RNA polymerase sigma factor RpoE
no
0.37
16
PFLU
_RS06310
sigma E protease regulator RseP
no
0.37
17
PFLU
_RS21260
DUF3509 domain-containing protein
no
0.36
18
PFLU
_RS18195
sugar-binding transcriptional regulator
no
0.36
19
PFLU
_RS16420
4-alpha-glucanotransferase
0.27
0.35
20
PFLU
_RS26965
mechanosensitive ion channel
no
0.34
Or look for
negative cofitness