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  • Top cofit genes for PFLU_RS14750 from Pseudomonas fluorescens SBW25-INTG

    tetratricopeptide repeat protein
    SEED: TPR domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFLU_RS25920 outer membrane protein assembly factor BamE 0.64 0.50
    2 PFLU_RS02000 penicillin-binding protein 1A 0.68 0.48
    3 PFLU_RS02460 alpha/beta fold hydrolase 0.77 0.47
    4 PFLU_RS26595 lipoprotein 0.71 0.46
    5 PFLU_RS03645 tetratricopeptide repeat protein 0.70 0.46
    6 PFLU_RS01645 S41 family peptidase 0.69 0.46
    7 PFLU_RS22615 zinc transporter ZntB 0.66 0.43
    8 PFLU_RS06555 OmpA family protein 0.67 0.42
    9 PFLU_RS24125 cold-shock protein 0.76 0.42
    10 PFLU_RS26770 DedA family protein 0.73 0.42
    11 PFLU_RS07785 VacJ family lipoprotein 0.66 0.41
    12 PFLU_RS04650 ABC transporter substrate-binding protein 0.74 0.41
    13 PFLU_RS04070 peptide chain release factor 3 0.71 0.40
    14 PFLU_RS04440 outer membrane lipid asymmetry maintenance protein MlaD 0.65 0.38
    15 PFLU_RS24485 hypothetical protein 0.65 0.38
    16 PFLU_RS04715 D-alanine--D-alanine ligase no 0.38
    17 PFLU_RS26545 sel1 repeat family protein 0.69 0.38
    18 PFLU_RS04415 LPS export ABC transporter periplasmic protein LptC no 0.37
    19 PFLU_RS28955 TIGR02449 family protein 0.64 0.37
    20 PFLU_RS29465 phosphomannomutase/phosphoglucomutase 0.17 0.37

    Or look for negative cofitness