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  • Top cofit genes for PFLU_RS04585 from Pseudomonas fluorescens SBW25-INTG

    fatty acid--CoA ligase
    SEED: Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-)
    KEGG: fatty-acyl-CoA synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PFLU_RS04600 LuxR family transcriptional regulator 0.75 0.55
    2 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.90 0.45
    3 PFLU_RS27605 acyl-CoA dehydrogenase 0.96 0.44
    4 PFLU_RS00715 efflux RND transporter periplasmic adaptor subunit 0.63 0.42
    5 PFLU_RS00710 DUF1656 domain-containing protein 0.35 0.42
    6 PFLU_RS00705 FUSC family protein 0.16 0.42
    7 PFLU_RS00720 efflux transporter outer membrane subunit 0.79 0.41
    8 PFLU_RS27620 acyl-CoA dehydrogenase 0.88 0.35
    9 PFLU_RS28690 FAD-binding oxidoreductase 0.44 0.35
    10 PFLU_RS27685 malate synthase G 0.89 0.33
    11 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA 0.45 0.33
    12 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.96 0.32
    13 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.57 0.31
    14 PFLU_RS28665 threonine ammonia-lyase, biosynthetic 0.36 0.30
    15 PFLU_RS18610 isocitrate lyase 0.88 0.29
    16 PFLU_RS10575 acetyl-CoA C-acetyltransferase no 0.29
    17 PFLU_RS15610 helix-turn-helix transcriptional regulator no 0.28
    18 PFLU_RS07650 fatty acid oxidation complex subunit alpha FadB 0.42 0.27
    19 PFLU_RS02500 sulfurtransferase no 0.27
    20 PFLU_RS20625 TetR/AcrR family transcriptional regulator 0.87 0.27

    Or look for negative cofitness