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  • Top cofit genes for PFLU_RS03980 from Pseudomonas fluorescens SBW25-INTG

    1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
    KEGG: AmpD protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFLU_RS27445 phosphotransferase 0.94 0.82
    2 PFLU_RS27440 nucleotidyltransferase family protein 0.92 0.82
    3 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.90 0.78
    4 PFLU_RS24475 AmpG family muropeptide MFS transporter 0.96 0.78
    5 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.88 0.76
    6 PFLU_RS07695 beta-N-acetylhexosaminidase 0.93 0.74
    7 PFLU_RS28725 DUF2059 domain-containing protein 0.84 0.65
    8 PFLU_RS06900 beta-glucosidase BglX 0.86 0.65
    9 PFLU_RS04385 RNase adapter RapZ 0.92 0.61
    10 PFLU_RS26545 sel1 repeat family protein 0.72 0.57
    11 PFLU_RS01840 glucans biosynthesis glucosyltransferase MdoH 0.95 0.55
    12 PFLU_RS26715 peptidase C13 0.76 0.54
    13 PFLU_RS06225 glycosyltransferase 0.45 0.53
    14 PFLU_RS01835 glucan biosynthesis protein G 0.92 0.51
    15 PFLU_RS22615 zinc transporter ZntB 0.80 0.51
    16 PFLU_RS29590 serine/threonine-protein phosphatase 0.79 0.50
    17 PFLU_RS26640 septal ring lytic transglycosylase RlpA family protein 0.76 0.48
    18 PFLU_RS26020 TetR/AcrR family transcriptional regulator 0.73 0.47
    19 PFLU_RS14550 UTP--glucose-1-phosphate uridylyltransferase GalU 0.89 0.47
    20 PFLU_RS25225 disulfide bond formation protein B 0.62 0.47

    Or look for negative cofitness