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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS01565 from
Pseudomonas fluorescens SBW25-INTG
membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS22535
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
no
0.29
2
PFLU
_RS12870
ABC transporter substrate-binding protein
0.18
0.23
3
PFLU
_RS12885
ABC transporter permease
no
0.23
4
PFLU
_RS01600
OFA family MFS transporter
no
0.22
5
PFLU
_RS12880
ABC transporter ATP-binding protein
no
0.21
6
PFLU
_RS29255
iron donor protein CyaY
no
0.21
7
PFLU
_RS16090
OprD family porin
no
0.20
8
PFLU
_RS17350
murein L,D-transpeptidase catalytic domain family protein
no
0.20
9
PFLU
_RS22040
NlpC/P60 family protein
no
0.20
10
PFLU
_RS02560
DNA mismatch repair endonuclease MutL
no
0.20
11
PFLU
_RS00395
DNA polymerase I
no
0.20
12
PFLU
_RS29705
rubredoxin
0.16
0.20
13
PFLU
_RS21295
50S ribosomal protein L3 N(5)-glutamine methyltransferase
no
0.19
14
PFLU
_RS07630
transglycosylase SLT domain-containing protein
no
0.19
15
PFLU
_RS14715
protein-glutamate O-methyltransferase CheR
no
0.19
16
PFLU
_RS30600
hypothetical protein
no
0.18
17
PFLU
_RS05665
aquaporin
no
0.18
18
PFLU
_RS06200
glycerol-3-phosphate 1-O-acyltransferase PlsB
no
0.18
19
PFLU
_RS21910
BamA/TamA family outer membrane protein
no
0.18
20
PFLU
_RS08185
DegT/DnrJ/EryC1/StrS aminotransferase family protein
no
0.18
Or look for
negative cofitness