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Cofit
Protein
Homologs
Top cofit genes for MMP_RS08885 from
Methanococcus maripaludis S2
tetratricopeptide repeat protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS04125
TetR/AcrR family transcriptional regulator
no
0.41
2
MMP
_RS04355
ribonuclease H family protein
no
0.37
3
MMP
_RS09040
AAA family ATPase
no
0.34
4
MMP
_RS04255
coenzyme F420 hydrogenase subunit beta
no
0.33
5
MMP
_RS05670
phosphate ABC transporter permease PstA
no
0.32
6
MMP
_RS01770
ATP-dependent endonuclease
no
0.32
7
MMP
_RS05645
AEC family transporter
no
0.32
8
MMP
_RS04390
hypothetical protein
no
0.31
9
MMP
_RS02610
DUF2162 domain-containing protein
no
0.31
10
MMP
_RS01195
metalloregulator ArsR/SmtB family transcription factor
no
0.29
11
MMP
_RS04345
MFS transporter
no
0.29
12
MMP
_RS03530
tetratricopeptide repeat protein
no
0.29
13
MMP
_RS04375
TetR/AcrR family transcriptional regulator
no
0.28
14
MMP
_RS04110
methyl-accepting chemotaxis protein
no
0.28
15
MMP
_RS09055
CAP domain-containing protein
no
0.28
16
MMP
_RS00535
TIGR00375 family protein
no
0.28
17
MMP
_RS02975
DUF2124 domain-containing protein
no
0.28
18
MMP
_RS02530
type II toxin-antitoxin system mRNA interferase toxin RelE/StbE family
no
0.28
19
MMP
_RS03060
MBL fold metallo-hydrolase
no
0.28
20
MMP
_RS04335
GTP-binding protein
no
0.27
Or look for
negative cofitness