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  • Top cofit genes for MMP_RS07850 from Methanococcus maripaludis S2

    prephenate dehydratase
    SEED: Prephenate dehydratase (EC 4.2.1.51)
    KEGG: prephenate dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS07650 TldD/PmbA family protein no 0.51
    2 MMP_RS07410 4-demethylwyosine synthase TYW1 no 0.46
    3 MMP_RS02960 class I SAM-dependent methyltransferase family protein no 0.46
    4 MMP_RS07835 TldD/PmbA family protein no 0.42
    5 MMP_RS01430 mechanosensitive ion channel family protein 0.36 0.37
    6 MMP_RS01435 DMT family transporter 0.35 0.34
    7 MMP_RS08760 hypothetical protein no 0.32
    8 MMP_RS07880 AAA family ATPase no 0.32
    9 MMP_RS03280 pyridoxamine 5'-phosphate oxidase family protein no 0.31
    10 MMP_RS03790 hypothetical protein no 0.31
    11 MMP_RS08240 methanogenesis marker 16 metalloprotein no 0.30
    12 MMP_RS07855 class I SAM-dependent methyltransferase no 0.30
    13 MMP_RS03215 MBL fold metallo-hydrolase no 0.30
    14 MMP_RS06340 phosphoadenosine phosphosulfate reductase family protein 0.43 0.29
    15 MMP_RS00530 tRNA pseudouridine(54/55) synthase Pus10 no 0.28
    16 MMP_RS01165 DUF434 domain-containing protein no 0.27
    17 MMP_RS07120 coenzyme F420 hydrogenase subunit alpha 0.49 0.27
    18 MMP_RS07125 coenzyme F420-reducing hydrogenase FrhD protein 0.45 0.27
    19 MMP_RS07090 tRNA (adenine-N1)-methyltransferase 0.33 0.26
    20 MMP_RS03420 acetolactate synthase small subunit 0.99 0.26

    Or look for negative cofitness