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  • Top cofit genes for MMP_RS07700 from Methanococcus maripaludis S2

    DUF1188 domain-containing protein
    SEED: Uncharacterized protein MJ0489

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS04850 UPF0254 family protein 0.87 0.95
    2 MMP_RS00725 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC 0.87 0.94
    3 MMP_RS07695 DUF3236 domain-containing protein 0.87 0.94
    4 MMP_RS00730 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB 0.88 0.92
    5 MMP_RS00735 5 10-methenyltetrahydromethanopterin hydrogenase 0.88 0.91
    6 MMP_RS06395 ThiF family adenylyltransferase 0.87 0.90
    7 MMP_RS00315 Nif3-like dinuclear metal center hexameric protein 0.89 0.89
    8 MMP_RS06725 hypothetical protein 0.68 0.76
    9 MMP_RS05295 minichromosome maintenance protein MCM 0.68 0.56
    10 MMP_RS06900 coenzyme F420-reducing hydrogenase FrhD protein no 0.54
    11 MMP_RS04955 DNA topoisomerase I no 0.53
    12 MMP_RS07115 MBL fold metallo-hydrolase no 0.51
    13 MMP_RS06015 flavodoxin family protein 0.83 0.50
    14 MMP_RS08500 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT no 0.48
    15 MMP_RS00310 CBS domain-containing protein no 0.48
    16 MMP_RS04450 P-II family nitrogen regulator no 0.47
    17 MMP_RS04465 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE no 0.47
    18 MMP_RS04440 nitrogenase iron protein no 0.47
    19 MMP_RS05535 hypothetical protein no 0.47
    20 MMP_RS04460 nitrogenase molybdenum-iron protein subunit beta no 0.46

    Or look for negative cofitness