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  • Top cofit genes for MMP_RS07445 from Methanococcus maripaludis S2

    helix-turn-helix domain-containing protein
    SEED: Energy conserving hydrogenase Eha-associated regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS07525 4Fe-4S binding protein 0.79 0.83
    2 MMP_RS08645 UPF0179 family protein no 0.75
    3 MMP_RS06680 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain 0.74 0.75
    4 MMP_RS04585 AIR synthase related protein no 0.75
    5 MMP_RS01500 CBS domain-containing protein no 0.74
    6 MMP_RS01985 F420-dependent methylenetetrahydromethanopterin dehydrogenase no 0.73
    7 MMP_RS00620 4Fe-4S binding protein 0.76 0.73
    8 MMP_RS06700 hypothetical protein 0.65 0.73
    9 MMP_RS02165 tRNA-dihydrouridine synthase no 0.72
    10 MMP_RS06685 formate dehydrogenase H subunit alpha selenocysteine-containing 0.73 0.71
    11 MMP_RS04870 TIGR02253 family HAD-type hydrolase no 0.71
    12 MMP_RS06295 methanogenesis marker 14 protein no 0.70
    13 MMP_RS07635 MogA/MoaB family molybdenum cofactor biosynthesis protein no 0.70
    14 MMP_RS01175 triphosphoribosyl-dephospho-CoA synthase no 0.68
    15 MMP_RS01445 hypothetical protein no 0.67
    16 MMP_RS00685 2-phospho-L-lactate guanylyltransferase no 0.67
    17 MMP_RS06105 hydrogenase maturation peptidase HycI no 0.67
    18 MMP_RS05430 TIGR00288 family NYN domain-containing protein no 0.66
    19 MMP_RS05515 cyclic pyranopterin monophosphate synthase MoaC no 0.65
    20 MMP_RS07685 TIGR01212 family radical SAM protein no 0.64

    Or look for negative cofitness