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  • Top cofit genes for MMP_RS07355 from Methanococcus maripaludis S2

    transcription factor S
    SEED: Transcription factor S
    KEGG: transcription elongation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS05535 hypothetical protein no 0.52
    2 MMP_RS07410 4-demethylwyosine synthase TYW1 no 0.52
    3 MMP_RS06725 hypothetical protein no 0.51
    4 MMP_RS08500 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT no 0.50
    5 MMP_RS07955 FumA C-terminus/TtdB family hydratase beta subunit no 0.49
    6 MMP_RS04850 UPF0254 family protein 0.54 0.48
    7 MMP_RS08660 DHH family phosphoesterase no 0.48
    8 MMP_RS05460 YcaO-related McrA-glycine thioamidation protein no 0.48
    9 MMP_RS07695 DUF3236 domain-containing protein 0.53 0.47
    10 MMP_RS06435 CBS domain-containing protein no 0.47
    11 MMP_RS05295 minichromosome maintenance protein MCM 0.45 0.47
    12 MMP_RS04955 DNA topoisomerase I no 0.47
    13 MMP_RS04785 hypothetical protein no 0.47
    14 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase no 0.46
    15 MMP_RS07090 tRNA (adenine-N1)-methyltransferase no 0.46
    16 MMP_RS00735 5 10-methenyltetrahydromethanopterin hydrogenase 0.49 0.45
    17 MMP_RS04450 P-II family nitrogen regulator no 0.45
    18 MMP_RS00725 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC 0.57 0.45
    19 MMP_RS02245 hypothetical protein no 0.44
    20 MMP_RS00750 fumarate hydratase no 0.44

    Or look for negative cofitness