Top cofit genes for MMP_RS06735 from Methanococcus maripaludis S2

class I SAM-dependent rRNA methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS08080		YchF/TatD family DNA exonuclease	0.50	0.38
2	MMP_RS08480		molybdate ABC transporter substrate-binding protein	no	0.34
3	MMP_RS02025		DNA-directed DNA polymerase	0.43	0.33
4	MMP_RS06085		iron ABC transporter substrate-binding protein	no	0.33
5	MMP_RS08285		serine/threonine protein kinase	no	0.32
6	MMP_RS05865		hypothetical protein	no	0.32
7	MMP_RS08130		IGHMBP2 family helicase	0.57	0.32
8	MMP_RS04995		hypothetical protein	no	0.32
9	MMP_RS05715		hypothetical protein	no	0.31
10	MMP_RS08325		hypothetical protein	no	0.30
11	MMP_RS04980		DUF2193 domain-containing protein	no	0.30
12	MMP_RS01635		thiamine pyrophosphate-dependent enzyme	no	0.29
13	MMP_RS04990		aquaporin family protein	0.36	0.29
14	MMP_RS08640		TIM barrel protein	0.52	0.29
15	MMP_RS06910		RlmF-related methyltransferase	no	0.29
16	MMP_RS02170		CBS domain-containing protein	no	0.28
17	MMP_RS06465		NERD domain-containing protein	no	0.28
18	MMP_RS01450		tRNA pseudouridine(38-40) synthase TruA	0.34	0.28
19	MMP_RS07675		S-layer protein	no	0.28
20	MMP_RS00435		CPBP family intramembrane metalloprotease	no	0.28

Or look for negative cofitness