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  • Top cofit genes for MMP_RS06290 from Methanococcus maripaludis S2

    DNA repair and recombination protein RadA
    SEED: DNA repair and recombination protein RadA
    KEGG: DNA repair protein RadA

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS05295 minichromosome maintenance protein MCM 0.92 0.79
    2 MMP_RS03245 DNA repair and recombination protein RadB no 0.57
    3 MMP_RS05535 hypothetical protein no 0.52
    4 MMP_RS06725 hypothetical protein no 0.48
    5 MMP_RS00315 Nif3-like dinuclear metal center hexameric protein 0.61 0.46
    6 MMP_RS03110 glycosyltransferase family 2 protein no 0.46
    7 MMP_RS04850 UPF0254 family protein 0.63 0.46
    8 MMP_RS07875 hypothetical protein no 0.45
    9 MMP_RS04955 DNA topoisomerase I no 0.44
    10 MMP_RS00810 topoisomerase DNA-binding C4 zinc finger domain-containing protein no 0.43
    11 MMP_RS03700 sodium:proton antiporter no 0.43
    12 MMP_RS00735 5 10-methenyltetrahydromethanopterin hydrogenase 0.68 0.43
    13 MMP_RS07820 UPF0104 family protein no 0.43
    14 MMP_RS00725 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC 0.67 0.42
    15 MMP_RS00915 DUF116 domain-containing protein no 0.42
    16 MMP_RS08155 hypothetical protein no 0.42
    17 MMP_RS07700 DUF1188 domain-containing protein 0.68 0.40
    18 MMP_RS00730 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB 0.67 0.40
    19 MMP_RS06395 ThiF family adenylyltransferase 0.63 0.40
    20 MMP_RS07695 DUF3236 domain-containing protein 0.63 0.40

    Or look for negative cofitness