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Cofit
Protein
Homologs
Top cofit genes for MMP_RS05900 from
Methanococcus maripaludis S2
tetratricopeptide repeat protein
SEED: TPR repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
MMP
_RS03870
purine NTPase
no
0.22
2
MMP
_RS02440
hypothetical protein
no
0.20
3
MMP
_RS03150
phosphoglycerate mutase
no
0.19
4
MMP
_RS05180
Nre family DNA repair protein
no
0.19
5
MMP
_RS08315
S-methyl-5-thioribose-1-phosphate isomerase
no
0.19
6
MMP
_RS05990
DsrE family protein
no
0.19
7
MMP
_RS05660
phosphate ABC transporter substrate-binding protein
no
0.18
8
MMP
_RS01130
flavoprotein
no
0.18
9
MMP
_RS03010
cupin domain-containing protein
no
0.18
10
MMP
_RS04350
2-hydroxyacyl-CoA dehydratase family protein
no
0.18
11
MMP
_RS01210
sodium:solute symporter
no
0.18
12
MMP
_RS02795
sulfate permease
no
0.17
13
MMP
_RS04820
methyl-accepting chemotaxis protein
no
0.17
14
MMP
_RS05530
signal peptide peptidase SppA
no
0.17
15
MMP
_RS01515
PINc/VapC family ATPase
no
0.16
16
MMP
_RS04730
flavodoxin family protein
no
0.16
17
MMP
_RS05790
HDIG domain-containing protein
no
0.16
18
MMP
_RS07145
AmmeMemoRadiSam system protein B
no
0.16
19
MMP
_RS08470
ATP-binding cassette domain-containing protein
no
0.16
20
MMP
_RS06520
DUF1786 domain-containing protein
no
0.16
Or look for
negative cofitness