Top cofit genes for MMP_RS04840 from Methanococcus maripaludis S2

response regulator
SEED: Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
KEGG: two-component system, chemotaxis family, response regulator CheY

Rank	Hit	Name	Description	Conserved?	Cofitness
1	MMP_RS04805		chemotaxis response regulator protein-glutamate methylesterase	0.94	0.37
2	MMP_RS01930		hypothetical protein	no	0.36
3	MMP_RS04825		protein-glutamate O-methyltransferase CheR	0.97	0.34
4	MMP_RS02795		sulfate permease	no	0.34
5	MMP_RS01895		flippase	no	0.33
6	MMP_RS01945		DUF4350 domain-containing protein	no	0.33
7	MMP_RS01920		glycosyltransferase family 2 protein	no	0.33
8	MMP_RS01910		UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	no	0.33
9	MMP_RS04810		chemotaxis protein CheA	0.65	0.33
10	MMP_RS01950		hypothetical protein	no	0.33
11	MMP_RS04665		SBBP repeat-containing protein	no	0.32
12	MMP_RS01905		glycosyltransferase	no	0.32
13	MMP_RS01915		DUF354 domain-containing protein	no	0.32
14	MMP_RS06310		NAD(P)/FAD-dependent oxidoreductase	no	0.32
15	MMP_RS01940		MoxR family ATPase	no	0.31
16	MMP_RS05640		UTP--glucose-1-phosphate uridylyltransferase GalU	no	0.31
17	MMP_RS01935		DUF58 domain-containing protein	no	0.30
18	MMP_RS01955		hypothetical protein	no	0.30
19	MMP_RS05180		Nre family DNA repair protein	no	0.30
20	MMP_RS08890		glycosyltransferase family 4 protein	no	0.29

Or look for negative cofitness