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  • Top cofit genes for MMP_RS04650 from Methanococcus maripaludis S2

    tetratricopeptide repeat protein
    SEED: GTP cyclohydrolase III (methanopterin)

    Rank Hit Name Description Conserved? Cofitness  
    1 MMP_RS06130 peptidylprolyl isomerase no 0.66
    2 MMP_RS01895 flippase no 0.64
    3 MMP_RS06980 tRNA 2-thiocytidine biosynthesis TtcA family protein no 0.63
    4 MMP_RS08605 flagellar protein E no 0.63
    5 MMP_RS00985 CDC48 family AAA ATPase no 0.62
    6 MMP_RS08890 glycosyltransferase family 4 protein no 0.61
    7 MMP_RS01380 PHP domain-containing protein no 0.61
    8 MMP_RS03155 precorrin-6A reductase 0.41 0.61
    9 MMP_RS08445 DUF2099 family protein no 0.61
    10 MMP_RS01725 class I SAM-dependent methyltransferase family protein 0.47 0.61
    11 MMP_RS01905 glycosyltransferase no 0.61
    12 MMP_RS08745 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase no 0.61
    13 MMP_RS05345 hypothetical protein no 0.61
    14 MMP_RS02135 DUF5612 domain-containing protein no 0.61
    15 MMP_RS06105 hydrogenase maturation peptidase HycI no 0.60
    16 MMP_RS07200 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase no 0.60
    17 MMP_RS01220 hypothetical protein no 0.60
    18 MMP_RS02195 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase no 0.60
    19 MMP_RS07875 hypothetical protein no 0.59
    20 MMP_RS03580 signal recognition particle-docking protein FtsY no 0.59

    Or look for negative cofitness